Features

1. Allows any ASFV lab to submit raw data.
2. Automatic annotation/de novo assembly.
3. Open access and downloads for other researchers to run quality control.
4. Ability to share sequencing data pre-publication to registered users.
5. Standardization of ASFV genome sequence quality. Calculated quality scores for each nucleotide will be viewable.
6. Centralized banking/storage of raw data and sequences. Automatic backups to remote locations will ensure long term survival with minimal costs.
7. The ability re-analyze in the future.

How?

1. Leveraging Scinet (ARS bioinformatics computer core).
2. Fast Analysis (Very costly using cloud computing will be free on Scinet).
3. Private dashboard for Researchers to use tools on there raw sequencing data (pre-publication).

Pipeline

1. User inputs raw data directly from sequencer.
2. User inputs consensus sequence.
3. User inputs annotation (optional)